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Projects / Programmes source: ARIS

Innovative affinity-based system for blood cell separation

Research activity

Code Science Field Subfield
4.06.00  Biotechnical sciences  Biotechnology   

Code Science Field
T490  Technological sciences  Biotechnology 

Code Science Field
3.04  Medical and Health Sciences  Medical biotechnology 
Keywords
affinity-based cell separation, antibody-functionalized fliter, automation, peripheral blood, cord blood, haematopoietic stem/progenitor cells
Evaluation (rules)
source: COBISS
Researchers (26)
no. Code Name and surname Research area Role Period No. of publicationsNo. of publications
1.  29835  PhD Tomaž Budefeld  Microbiology and immunology  Researcher  2020 - 2022  92 
2.  36818  PhD Helena Sabina Čelešnik  Biochemistry and molecular biology  Researcher  2019 - 2022  61 
3.  33622  Darja Farasin    Technical associate  2020 - 2022 
4.  26010  PhD Boris Gole  Biochemistry and molecular biology  Head  2019 - 2022  74 
5.  19399  Tatjana Golob    Technical associate  2019 - 2020 
6.  33268  PhD Mario Gorenjak  Biochemistry and molecular biology  Researcher  2019 - 2022  163 
7.  34478  PhD Larisa Goričan  Microbiology and immunology  Researcher  2019 - 2022  35 
8.  20420  PhD Lidija Gradišnik  Neurobiology  Researcher  2019 - 2022  291 
9.  39240  PhD Gregor Jezernik  Microbiology and immunology  Researcher  2019 - 2021  39 
10.  38674  PhD Amadeja Koler  Chemistry  Researcher  2019 - 2022  32 
11.  15501  PhD Peter Krajnc  Chemistry  Researcher  2019 - 2022  487 
12.  15128  PhD Aleksander Kustec  Literary sciences  Technical associate  2019 - 2020  29 
13.  33260  PhD Tina Maver  Medical sciences  Researcher  2021 - 2022  177 
14.  30850  PhD Uroš Maver  Medical sciences  Researcher  2019 - 2022  452 
15.  50675  PhD Marko Milojević  Metabolic and hormonal disorders  Researcher  2019 - 2022  59 
16.  25663  PhD Muzafera Paljevac  Chemistry  Researcher  2019 - 2022  127 
17.  16340  PhD Uroš Potočnik  Microbiology and immunology  Researcher  2019 - 2022  629 
18.  28417  PhD Katja Repnik  Microbiology and immunology  Researcher  2019  132 
19.  52911  Kristijan Skok  Medical sciences  Researcher  2019 - 2022  91 
20.  32141  PhD Janja Stergar  Chemistry  Researcher  2019 - 2021  123 
21.  32132  PhD Andraž Stožer  Metabolic and hormonal disorders  Researcher  2019 - 2022  425 
22.  01324  PhD Iztok Takač  Human reproduction  Researcher  2019 - 2022  911 
23.  50193  Matic Tement  Medical sciences  Researcher  2022 
24.  53295  Tadej Tofant    Technical associate  2019 - 2022  13 
25.  54489  Jernej Vajda  Medical sciences  Junior researcher  2020 - 2022  13 
26.  29048  PhD Aleš Zalaznik  Electronic components and technologies  Researcher  2019 - 2022  63 
Organisations (3)
no. Code Research organisation City Registration number No. of publicationsNo. of publications
1.  2334  University of Maribor, Faculty of Medicine  Maribor  5089638048  16,524 
2.  0794  University of Maribor, Faculty of Chemistry and Chemical Engineering  Maribor  5089638012  13,115 
3.  2969  STRIP'S, Elektrotehnika - elektronika, d.o.o. (Slovene)  Vače  5871603  120 
Abstract
Efficient and reliable isolation of specific cells from complex, multi-component biological samples such as blood is prerequisite for many analytical and preparative methods and assays. Recent breakthroughs, such as novel findings related to the autoimmune disorders or leukaemia demanded isolation of specific types of blood cells, more precisely subtypes of the peripheral blood mononuclear cells. Isolation of haematopoietic stem/progenitor cells (HSPCs) from cord blood, peripheral blood apheresis or bone marrow is also of extreme interest for both the scientific and medical community. Stem cells including HSPCs are already used in cell therapies. Despite multiple developed techniques efficient and reliable separation of different cell populations from blood is still particularly challenging due to the erythrocytes and blood plasma. Systems currently providing high purity and reliability of cell isolation from blood are expensive, labour intensive (FACS), or have a low yield and throughput (MACS). Also, they demand prior labelling of the cells with specific antibodies which enable isolation of the target cells. After the separation, the target cell population is therefore fluorescently or magnetically-labelled, which may be a problem for downstream applications. Antibody-independent techniques in principle render isolation of label-free target cells, however, use of most is strongly influenced by the cell size and do not permit separation of the cells of similar sizes, which is often needed. Others, based on specific materials are limited to single cell types. To bypass this inflexibility, materials may be functionalized using wide variety of complementary molecules- peptides, aptamers or antibodies, however, specific release strategies need to be used then in order to collect the target cells. The objective of the proposed project is to create an innovative passive cell separation system, enabling easy and efficient isolation of different cell populations from peripheral and cord blood with less manipulation, higher yield and lower costs than current systems. The proposed novel system is based on the state-of-the-art affinity-based cell separation using a filter that combines inert synthetic fabric, preventing unspecific cell binding, and specific antibodies to capture the target cells. In the end we will integrate the finalized filter into an automated system reducing the chances for a human error, enabling multistep cell isolation, regulation of operation and instant monitoring of the isolation yield. Our proposal upgrades the existing solutions for passive cell isolation based on synthetic polymers and with utilisation of specific antibodies adds to them flexibility characteristic for FACS and MACS systems. This will enable a wide range of isolation of different cell types from peripheral and cord blood. At the same time, with the immobilisation of the antibodies on the carrier (filter) it retains one of the key advantages of the passive cell separation systems- unchanged surface properties of the isolated cells. The project is divided into successive work packages and a package dedicated to the project management, IP protection and dissemination of the results. Activities, timelines, milestones and expected results are defined for all the WPs, as well as the potential risks and risk management solutions. The packages will be led by excellent researchers from relevant fields. The project team from the three participating institutes- Medical Faculty Maribor, Faculty for Chemistry and Chemical Technology Maribor and partner form the industry Strip's provides all the necessary expertise for a successful implementation and finalization of the project. All the necessary equipment for the implementation of the project is available. Thereby the project is completely feasible with the funds provided within the call. The preliminary feasibility study already resulted in a patent application PTC/SI2018/050035.
Significance for science
The objective is to create an innovative passive cell separation system, enabling easy and efficient isolation of different cell populations from peripheral and cord blood with less manipulation, higher yield and lower costs than current systems. The proposed novel system is based on the state-of-the-art affinity-based cell separation using a filter that combines inert synthetic fabric, preventing unspecific cell binding, and specific antibodies to capture the target cells. Our proposal upgrades the existing solutions for passive cell isolation based on synthetic polymers and with utilisation of specific antibodies adds to them flexibility characteristic for FACS and MACS systems. The system thus combines advantages of the passive cell separation (unchanged surface properties of the isolated cells) and of the specific antibody-based methods (flexibility). In the end we will integrate the finalized filter into an automated system enabling multistep cell isolation, regulation of operation (i.e. fluids flow on the filter, temperature regulation) and instant monitoring of the isolation yield (cell counter). Integration into an automated system also considerably reduces risk of human error. Different cell populations that could be isolated with the new system will subsequently be useful in precise study of the contribution of individual blood cell populations in complex diseases and also in development of cell therapies. The expected lower costs and higher yield of isolations also translate into greater affordability of the "downstream" applications of the isolated cells in research and therapeutic purposes, both of which is of great significance. Our proposal has a great innovative potential on a global scale. Two patent applications are possible (the filter and the automated system). Industry’s interest for the project has already been demonstrated by the willingness of the industrial partner to co-finance and actively participate in the development.
Significance for the country
In the implementation phase the project will enable new recruitment of highly qualified researchers both in the public and private-industrial spheres in the Eastern cohesion region. Successful completion of the project will be followed by industrial development and commercialization, which will directly affect the increase in revenues from market activity on the part of the participating public institution and increased sales on the company's side. In addition to direct financial effects, the project will consolidate the position of the University of Maribor as a development partner for the industry and of the company Strip's as a development and production partner in the field of medical devices and enable it to position well in the target markets. The project will also enable the development and production of high added value products.
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