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Projects / Programmes source: ARIS

Biophysical processes studied with optical tweezers

Research activity

Code Science Field Subfield
1.02.00  Natural sciences and mathematics  Physics   

Code Science Field
B002  Biomedical sciences  Biophysics 
B120  Biomedical sciences  Molecular biophysics 
Keywords
molecular motors, optical tweezers, proteins, myosin, cytoskeleton, actin, chemomechanical cycle, stepping kinetics, bead assays, motility assays, processivity.
Evaluation (rules)
source: COBISS
Researchers (7)
no. Code Name and surname Research area Role Period No. of publicationsNo. of publications
1.  13497  PhD Dušan Babič  Physics  Researcher  2004 - 2007  131 
2.  03470  PhD Martin Čopič  Physics  Head  2004 - 2007  510 
3.  10373  PhD Irena Drevenšek Olenik  Physics  Researcher  2004 - 2007  575 
4.  08851  PhD Igor Poberaj  Physics  Researcher  2004 - 2007  195 
5.  18691  PhD Lea Spindler  Physics  Researcher  2004 - 2007  151 
6.  21609  PhD Andrej Vilfan  Physics  Researcher  2004 - 2007  246 
7.  18275  PhD Mojca Vilfan  Physics  Researcher  2004 - 2007  159 
Organisations (2)
no. Code Research organisation City Registration number No. of publicationsNo. of publications
1.  0106  Jožef Stefan Institute  Ljubljana  5051606000  90,706 
2.  1554  University of Ljubljana, Faculty of Mathematics and Physics  Ljubljana  1627007  34,103 
Abstract
Optical tweezers allow manipulation of beads of a few 100 nanometers in size, detection of their position with nanometric precision and application of forces in the order of piconewtons. This makes them an excellent tool for observation of biological processes on the level of single proteins. Within this project, we will use optical tweezers for studying the molecular motor myosin - the protein responsible for muscle contraction and intracellular transport - on the level of single molecules or small groups of coupled motors. Our experimental setup enables simultaneous positioning and detection of several beads, which is ideal for observing undisturbed motors. New feedback mechanisms for controlling the force on the protein as a function of its mechanical state will be introduced. We will be able to resolve different states in the duty cycle, predicted by theoretical models but not yet experimentally observed. With these experiments we will significantly contribute to a deeper understanding of the myosin working cycle and thus of effective conversion of chemical energy into mechanical work. We will improve the accuracy of mechanical and kinetic measurements and we expect to fill the present gap between macroscopic and microscopic measurements. Additionally, optical tweezers will be used for studying other biological systems, especially for microrheology of actin networks as a model system for the cytoskeleton.
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