PhD Jernej Jakše

PhD Jernej Jakše
no.: 16379 source: ARIS

researcher – active in research organisation
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  • Writing: Fluent
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Research activity

Code Science Field Subfield
4.03.01  Biotechnical sciences  Plant production  Agricultural plants 
4.06.05  Biotechnical sciences  Biotechnology  Plant biotechnology 

Code Science Field
B225  Biomedical sciences  Plant genetics 
Keywords
plant genetics, molecular markers, DNA sequencing, next generation sequencing, NGS, bioinformatics
Bibliography Representative bibliographic units | Personal | COBISS+
source: COBISS
source: SICRIS
Evaluation (metodology)
Evaluation of bibliographic research performance indicators according to ARIS methodology
source: COBISS
source: ARIS
Points
1,332.47
A''
237.26
A'
723
A1/2
974.54
CI10
1,841
CImax
82
h10
24
A1
4.84
A3
0.16
Data for the last 5 years (citations for the last 10 years) on May 22, 2026; Data for score A3 calculation refer to period 2020-2024 (2021, 2022, 2023, 2024)
Data for ARIS tenders ( 21.05.2024 – Target research programmes, archive )
Citations Citations for bibliographic records in COBIB.SI that are linked to records in citation databases
source: WoS source: Scopus source: COBISS
Database Linked records Citations Pure citations Average pure citations
WoS 148  2,542  2,127  14.37 
Scopus 167  2,903  2,423  14.51 
Mentoring junior researchers
source: ARIS
no. Name and surname Type Period Code
1 PhD Andrej Sečnik   Bologna doctoral studies  10/1/2019 - 9/30/2023  53626 
2 PhD Taja Jeseničnik   Bologna doctoral studies  11/1/2014 - 7/15/2020  37427 
3 PhD Tine Pokorn   Bologna doctoral studies  11/1/2011 - 11/3/2017  34333 
4 PhD Aljaž Majer   Bologna doctoral studies  10/1/2009 - 3/31/2014  31918 
5 PhD Tjaša Marolt   Uniform doctoral studies  10/1/2008 - 12/20/2013  30862 
6 PhD Tjaša Gril   Uniform doctoral studies  11/1/2006 - 4/30/2009  28496 
Education
source: ARIS
Level of education Professional title Study subject Faculty Year
  B. Sc.   Agronomy  SI University of Ljubljana, Biotechnical Faculty, Department of Agronomy 1996 
Master's degree      SI University of Ljubljana, Biotechnical Faculty 2000 
Doctoral degree  Ph. D.     SI University of Ljubljana, Biotechnical Faculty 2003 
Doctoral dissertations and other final papers Show
Obtaining results now
source: COBISS
Employments
source: ARIS
Type of employment Research org. Research group Date of employment Position Role Title
Full time employment (120%, RD:29%)  University of Ljubljana, Biotechnical Faculty  Agrobiotechnology  4/1/2003  Research Assistant  Researcher  Full professor 
Research projects Legend
source: ARIS
no. Code Title Period Head
1. J4-70162  EnviroViroSeq: Advanced HTS and AI-Powered Analysis of Viromes in Hops and the Environment   3/1/2026 - 2/28/2029  PhD Tanja Guček   2,396 
2. J4-70158  Investigation of miRNA-mediated defense mechanism against Verticillium nonalfalfae in hops using CRISPR/Cas9   3/1/2026 - 2/28/2029  PhD Ester Stajič   1,928 
3. J4-70163  Mycoviruses and Their Role in Controlling Verticillium Wilt Disease   3/1/2026 - 2/28/2029  PhD Vanja Miljanić   1,551 
4. J7-60131  Integration of epigenomics and spatial transcriptomics in polygenic obesity animal model   1/1/2025 - 12/31/2027  PhD Tanja Kunej   2,839 
5. J4-4552  Adaptation of wine yeasts to climate change   10/1/2022 - 9/30/2025  PhD Neža Čadež   4,916 
6. V4-2203  Evaluation of genotypes and develoment of crossing families for resistance studies of hop Humulus lupulus L. to severe viroid hop stunting disease   10/1/2022 - 9/30/2025  PhD Andreja Čerenak   2,678 
7. V4-2204  Technologies in grapevine nursery with innovative solutions to strengthen the resilience of sustainable viticulture   10/1/2022 - 9/30/2025  PhD Denis Rusjan   3,165 
8. J1-3017  Development of a sensitive and selective electrochemical genosensor for on-site detection of Citrus bark cracking viroid (CBCVd)   11/1/2021 - 10/31/2024  PhD Samo Hočevar   2,509 
9. J4-8220  Funkcionalna in strukturna analiza verticilijskih efektorskih proteinov in njihovih tarč v hmelju in modelnih rastlinah (Slovene)   5/1/2017 - 4/30/2020  PhD Sabina Berne   2,776 
10. L4-6809  Analiza odziva rastlin ob hkratnih okužbah viroidov in identifikacija odpornosti (Slovene)   7/1/2014 - 6/30/2017  PhD Sebastjan Radišek   3,842 
11. V4-1405  Development of technologies for preventing new viroid diseases of hop   7/1/2014 - 12/31/2016  PhD Sebastjan Radišek   3,705 
12. J4-4153  Uporaba kombinacije tehnike naslednje generacije določevanja nukleotidnih zaporedij in metagenomske analize v diagnostiki pojava hmeljeve zakrnelosti (Slovene)   7/1/2011 - 6/30/2014  PhD Jernej Jakše   3,602 
13. V4-1056  Determinacija in vrednotenje genskih virov oljk v nacionalnih kolekcijah Slovenije z uporabo markerjev DNA (Slovene)   10/1/2010 - 9/30/2012  PhD Dunja Bandelj   1,617 
14. J4-2296  Transkriptom plodu oljke ? razvoj oznak izraženih zaporedij (EST) oljčnega plodu za študije tkivno specifičnih metabolnih poti (Slovene)   5/1/2009 - 4/30/2012  PhD Jernej Jakše   3,488 
15. J1-0017  Biodiversity Pattern and Process in Southeastern Europe   2/1/2008 - 1/30/2011  PhD Boris Kryštufek   2,753 
16. V4-0318  Izdelava podatkovne baze DNA opisov tradicionalnih oljčnih sort slovenske Istre za podporo sledljivosti istrskega oljčnega olja in za potrebe pospeševanja gojenja starejših oljčnih sort (Slovene)   10/1/2006 - 9/30/2008  PhD Jernej Jakše   1,661 
17. V4-0340  Razvoj in vpeljava sodobnih tehnologij za sanacijo tal na izkrčenih hmeljiščih zaradi okužb s karantensko boleznijo hmeljevo uvelostjo (Verticillium spp.) (Slovene)   10/1/2006 - 9/30/2008  PhD Sebastjan Radišek   3,554 
18. J4-6030  CHARACTERISATION OF cv. ISTRSKA BELICA   7/1/2004 - 6/30/2007  PhD Metoda Lipnik Štangelj   3,158 
19. V4-0749  Uvajanje novih metod za vzgojo kultivarjev hmelja, odpornih na Verticilium sp. (Slovene)   10/1/2002 - 9/30/2005  PhD Branka Javornik   3,586 
20. V4-0754  Razvoj metode za določevanje viroida in uvajanje metod za rutinsko določanje viroida in virusov v hmelju (Slovene)   10/1/2002 - 9/30/2004  PhD Branka Javornik   2,680 
ARIS research and infrastructure programmes Legend
source: ARIS
no. Code Title Period Head
1. P4-0077  Genetics and Modern Technologies of Crops   1/1/2019 - 12/31/2027 PhD Jernej Jakše   3,659 
2. P4-0077  Genetics and Modern Technologies of Crops   1/1/2015 - 12/31/2018 PhD Jernej Jakše   5,322 
3. P4-0077  Genetics and Modern Technologies of Crops   1/1/2009 - 12/31/2014 PhD Branka Javornik   5,907 
4. P4-0077  Genetics and Modern Technologies of Crops   1/1/2004 - 12/31/2008 PhD Branka Javornik   6,253 
5. P0-0513-0481  Genetics and Plant Biotechnology   1/1/1999 - 12/31/2003 PhD Branka Javornik   3,094 
International projects
no. Code Title Period Head
1. HORIZON-ViroiDoc    1/1/2025 - 12/31/2028 PhD Sabina Berne    
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