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Projects / Programmes source: ARRS

Gynecology and Reproduction: Genomics and Stem Cells

Periods
Research activity

Code Science Field Subfield
3.05.00  Medical sciences  Human reproduction   

Code Science Field
B000  Biomedical sciences   

Code Science Field
3.02  Medical and Health Sciences  Clinical medicine 
Keywords
genome medicine, gynaecology and reproduction, personalised medicine, next generation sequencing, stem cells, microbiom
Evaluation (rules)
source: COBISS
Researchers (42)
no. Code Name and surname Research area Role Period No. of publicationsNo. of publications
1.  53392  PhD Ivana Babić Božović  Medical sciences  Researcher  2019  56 
2.  21364  PhD Helena Ban Frangež  Medical sciences  Researcher  2015 - 2019  178 
3.  13314  PhD Matija Barbič  Medical sciences  Researcher  2018 - 2019  161 
4.  28897  Tamara Bertoncelj    Technician  2015 - 2019 
5.  30421  PhD Mija Blaganje  Medical sciences  Researcher  2015 - 2019  187 
6.  33343  PhD Tanja Burnik Papler  Medical sciences  Researcher  2015 - 2019  53 
7.  28348  PhD Ines Cilenšek  Medical sciences  Technician  2015 - 2019  38 
8.  32106  PhD Barbara Golob  Medical sciences  Researcher  2015 - 2019  18 
9.  38272  PhD Keli Hočevar  Medical sciences  Junior researcher  2015 - 2019  18 
10.  36869  PhD Alenka Hodžić  Medical sciences  Researcher  2015 - 2019  35 
11.  26061  PhD Helena Jaklič  Medical sciences  Researcher  2015 - 2019  33 
12.  36940  Anita Jančar    Technician  2015 - 2019 
13.  25612  PhD Nina Jančar  Medical sciences  Researcher  2015 - 2019  131 
14.  37651  Esada Kerić    Technician  2019 
15.  33341  PhD Katja Knez  Medical sciences  Researcher  2015 - 2016 
16.  06970  PhD Borut Kobal  Medical sciences  Researcher  2018 - 2019  408 
17.  50624  Urška Kotnik  Medical sciences  Junior researcher  2017 - 2019  16 
18.  30697  PhD Anja Kovanda  Medical sciences  Researcher  2017 - 2019  67 
19.  30148  Marjeta Kuhar    Technician  2016 - 2019 
20.  29685  Tina Likar  Medical sciences  Junior researcher  2015 - 2016 
21.  23434  PhD Luca Lovrečić  Medical sciences  Researcher  2015 - 2019  153 
22.  06171  PhD Adolf Lukanovič  Medical sciences  Researcher  2015 - 2019  763 
23.  34579  PhD Aleš Maver  Medical sciences  Researcher  2015 - 2019  175 
24.  17644  Jožica Mivšek    Technician  2015 - 2019  65 
25.  31217  Iryna Nikolayeva    Technician  2015 - 2019 
26.  26230  Petra Nussdorfer    Technician  2015  10 
27.  23818  PhD Tadej Pajič  Medical sciences  Researcher  2019  173 
28.  53979  Simona Petač    Technician  2019 
29.  53254  Ana Marija Peterlin  Medical sciences  Technician  2019  23 
30.  10458  PhD Borut Peterlin  Medical sciences  Principal Researcher  2015 - 2019  812 
31.  11252  PhD Danijel Petrovič  Medical sciences  Researcher  2015 - 2019  309 
32.  15416  PhD Barbara Požlep  Medical sciences  Researcher  2015 - 2019  72 
33.  28621  Bernarda Prosenc  Medical sciences  Technician  2015 - 2019 
34.  22501  PhD Mihael Rogač  Medical sciences  Researcher  2015 - 2019  45 
35.  21362  PhD Špela Smrkolj  Medical sciences  Researcher  2015 - 2019  271 
36.  23076  Andrej Stegnar    Technician  2015 - 2019 
37.  36428  Lovro Vidmar  Medical sciences  Junior researcher  2015 - 2018  12 
38.  32009  PhD Tanja Višnjar  Medical sciences  Researcher  2019  41 
39.  12177  PhD Eda Vrtačnik-Bokal  Medical sciences  Researcher  2015 - 2019  586 
40.  20257  PhD Karin Writzl  Medical sciences  Researcher  2015 - 2019  196 
41.  53977  Ana Nyasha Zimani  Medical sciences  Technician  2019 
42.  19449  PhD Branko Zorn  Medical sciences  Researcher  2015 - 2018  306 
Organisations (2)
no. Code Research organisation City Registration number No. of publicationsNo. of publications
1.  0312  University Medical Centre Ljubljana  Ljubljana  5057272000  74,065 
2.  0381  University of Ljubljana, Faculty of Medicine  Ljubljana  1627066  45,192 
Abstract
The basic premise of the program is that the results of genomic and other “omic” technologies, their integration, as well as stem cell technology can contribute significant new insights into the understanding, diagnosis, prevention and treatment of human disease. The program aims to use state of the art genomic methodologies, including Next Generation Sequencing (for the purpose of exome / genome sequencing), global transcriptomic and epigenetic analysis, microbiome analysis and stem cell technology, in order to further our knowledge in the fields of etiology and the mechanisms of selected pathologic states in gynecology and obstetrics such as gynecological cancer (i.e. breast cancer, ovarian cancer and other cancer syndromes which affect reproductive organs), endometriosis, male infertility and preterm birth. With the development of new algorithms for clinical interpretation of genomic data we will contribute to bridging the gap in translating next generation sequencing methods to clinical diagnostics. We will use new genomic methods to develop innovative, noninvasive methods of prenatal screening for aneuploidies and genetic diagnostics of monogenic disease, and also for the purpose of preimplantational genetic diagnosis. In this context we will be contributing to the development of methods for primary prevention of genetic disease. With the help of global genomic analysis (NGS, transcriptomics), we will provide new understanding of the processes involved in successful natural and assisted reproduction. Using analysis and integration of personal genomic information (exome / genome sequences, familiy history provided on the basis of a studied illness or familial disease), personal exposome (information about environmental risk factors) and microbiome data (profiling done based on next generation sequencing) we aim to develop predictive models that will contribute to bettering the development of personalized medicine, as well as translating our findings of basic biomedical research into clinical practice. In the proposed program we intend to continue transferring innovative, pioneering treatment using stem cells in the field of urinary incontinence in every day clinical practice. By acquiring original scientific knowledge we will not only contribute to the development of the gynecological and obstetric professions and genomic medicine, but we will also further the improvement of new scientific services in the previously mentioned fields, and contribute to the education of research and clinical personnel. In this way, we aim to help to improve our National Health System and with that the health and quality of life of the general population.
Significance for science
Using innovative state of the art genomic methodologies, including Next Generation Sequencing (for the purpose of exome / genome sequencing), we plan to contribute to our knowledge in the fields of etiology and the mechanisms of selected pathologic states in gynecology and obstetrics such as gynecological cancer (i.e. breast cancer, ovarian cancer and other cancer syndromes which affect reproductive organs), endometriosis, male infertility and preterm birth as well as contribute new approaches to primary prevention of genetic disorders and improve success of assisted reproduction. With the development of new algorithms for clinical interpretation of genomic data we will contribute to bridging the gap in translating next generation sequencing methods to clinical diagnostics. Using analysis and integration of personal genomic information (exome / genome sequences, family history provided on the basis of a studied illness or familial disease), personal exposome (information about environmental risk factors) and microbiome data (profiling done based on next generation sequencing) we aim to develop predictive models that will contribute to bettering the development of personalized medicine, as well as translating our findings of basic biomedical research into clinical practice. In the proposed program we also intend to continue transferring innovative, pioneering treatment using stem cells in the field of urinary incontinence in every day clinical practice.
Significance for the country
By acquiring original scientific knowledge we will not only contribute to the development of the gynecological and obstetric professions and genomic medicine, but we will also contribute to the education of research and clinical personnel. In this way, we aim to help to improve our National Health System and with that the health and quality of life of the general population.
Most important scientific results Annual report 2015, interim report, final report
Most important socioeconomically and culturally relevant results Annual report 2015, interim report, final report
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